Deconstructing the “Scientific Miracles in the Quran” Argument


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Going to a masjid and finding pamphlets with the title “Scientific Miracles in the Quran” is common. Dawah companies continue to propagate such material in a vain attempt to show why Islam is “true,” strangely continuing to do so even after the constant contradictions such an approach creates. Critical examination reveals how such an approach not only disassociates from our own tradition, but also adopts Christian-style apologetics to convey Islam.

Here are some examples of such miracles:

  1. The Quran predicts the Earth is the shape of an ostrich egg.
  2. The Quran mentions tectonic plates.
  3. The Quran says that flesh came before bones.
  4. The Quran predicts the Big Bang Theory.
  5. The Quran describes the water cycle.
  6. The Quran talks about modern embryology.
  7. The Quran mentions iron being sent to the earth.
  8. The Quran informs that the earth isn’t flat, but round.

And all of this 1400 years ago!

The Scientific Method and the Quran

Before understanding why asserting the truth of the Quran through science is wrong, we must first understand what the scientific method is and how it works. Science works via induction. Data is obtained and models are built to explain that data. Science is probabilistic in nature and does not claim to explain something with absolute certainty. As new data arrive that are overwhelming enough to render previous or existing models redundant, theories change. This is self-evident from the history of science, from the Copernican revolution overturning polemic models of the universe to Einstein’s general relativity overshadowing Newtonian mechanisms. Science is ever-changing.

Thus, to then project scientific theories onto the Quran is to establish belief on purely probabilistic ground, preventing assertion of the truth of the Quran with absolute certainty. Imagine a scientific model as a ship; when the winds and tide – symbolizing observational data – change, so does the direction of the ship. Is the Qur’an suddenly wrong if science changes? Selectively choosing interpretations that fit our apologetic claims is the highest disservice one can do to the Quran. The consequence of such an approach is widespread confusion and doubt.

Confusions of an Epic Proportion

Such arguments swayed me when I was a teenager. Dr. Zakir Naik’s talks regarding how the Quran predicted findings in geology, cosmology, and embryology fascinated me. They were a driving force for the truth of Islam and many people converted to Islam because of them. Though temporarily amazing to see such predictions, the infatuation with them was short-lived.

During the beginning of college, I watched a video of brothers Hamza Tzortzis and Adnan Rashid arguing outside an atheist convention with PZ Myers regarding a particular verse. Brother Adnan argued that the Quran claims that bone came before flesh. Myers immediately countered by saying that this is false, as they both form together. Rashid responded that the Quran is still right because the word “thumma” in the verse can also mean simultaneously. Such apologetics clearly cause embarrassment.

Then We made the sperm-drop into a clinging clot, and We made the clot into a lump [of flesh], and We made [from] the lump, bones, and We covered the bones with flesh; then We developed him into another creation. So blessed is Allah, the best of creators” [23:14]

The verse in question gives no reason to assume that bones come before flesh or vice versa. Such an assumption is our own projection onto the Quran of a scientific interpretation. Why use science to affirm the Quran or the Quran to affirm science?

My faith cast into doubt, I contacted brother Hamza and he agreed to meet me in his office. Brother Hamza was kind, considerate, and comforting. He showed me his article Does the Qur’an Contain Scientific Miracles? A New Approach on how to Reconcile and Discuss Science in the Qur’an,” in which, he demonstrated the incoherence of the “Scientific Miracles in the Quran”’ argument. This argument gained popularity in the 1990’s due to Dr. Zakir Naik, one of its most popular proponents, and although its popularity has decreased overall, it remains popular among many individuals.


There are perhaps two reasons why this movement gained popularity:

  1. Detachment from our rich Islamic Intellectual tradition
  2. Adoption of Christian apologetics in Islamic discourse

Praises of the “Islamic Golden Age” often mention scientific advancements and discoveries. However, these advancements were the by-product of a rigorous intellectual tradition that prioritized philosophical thought and critical thinking. Islamic scholars, motivated by verses that called for man to follow His law (shariah) and view the signs of God in the universe, produced wonderful works in philosophy, theology, and science.

Science is simply a tool for Islam

The philosopher of science, Jeffrey Koperski, highlights how science is molded by metatheoretic shaping principles. Today, methodological naturalism (MN) [1], which maintains two basic assumptions: mechanistic causation [2] and uniformity of nature [3], is the most dominant principle. In isolation, methodological naturalism is arguably neutral, but has become synonymous with ontological naturalism [4], a term described by enlightenment thinkers as materialism. In this metaphysical worldview, all that exists is matter and energy and anything additional, such as God, does not exist.

Given the current scientific method is shaped by methodological naturalism – which itself is intertwined with ontological naturalism – it is clear that the “Scientific Miracles in the Quran” approach towards Islam will always be a reconciliatory one. The constraints of metaphysical commitments on science cause some to become biased towards adopting certain approaches and believe that there is a conflict between science and religion that must be reconciled. Rather than attributing all possible explanations to God, with science being simply a tool to identify the best explanation, the “Scientific Miracles in the Quran” approach takes the best scientific explanation and tries to reconcile God and His religion with it.

The trendiness of such an approach is symptomatic of a deeper problem: Muslims have not been able to harness and build a metaphysical worldview in which God is the cause of all reality. It is not that our tradition lacks answers, but that we do not explore our tradition. Thus, such approaches will continue unless we reclaim our tradition, rigorously assessing and proposing models in which God, not naturalism, is the ultimate ontological feature.

Key Terms:

  1. Methodological Naturalism:  Robert T. Pennock uses the term to clarify that the scientific method is limited to natural explanations without assuming the existence or non-existence of the supernatural (, 2018).
  2. Mechanistic causation: A mechanistic theory of causality holds that this metaphysical connection is very close: two events are causally connected if and only if they are connected by an underlying physical mechanism of the appropriate sort. (Williamson, J., 2011).
  3. Uniformity of nature: This principle states that the course of nature continues uniformly, e.g. if X is the cause of Y, then Y will necessarily exist whenever X exists. In particular, the uniformities observed in the past will hold for the present and future as well. (, 2018).
  4. Ontological Naturalism: All spatiotemporal (belonging to both time and space) entities must be identical or constituted by the physical (Papineau, 2018).

Works Cited:

  1. “Naturalism (Philosophy).” Wikipedia, Wikimedia Foundation, 14 Feb. 2020,
  2. Papineau, David. “Naturalism.” Stanford Encyclopedia of Philosophy, Stanford University, 15 Sept. 2015,
  3. Williamson, Jon. “Mechanistic Theories of Causality Part I.” Philosophy Compass, vol. 6, no. 6, 2011, pp. 421–432.,
  4. “Probable reasoning has no rational basis.”,

About the Author: Anas Malik is a biochemistry graduate currently pursuing his Master’s in Neuroscience. He also studies Maliki Fiqh and Arabic part time. His interests include science, religion, and the philosophy of mind.

Disclaimer: Material published by Traversing Tradition is meant to foster scholarly inquiry and rich discussion. The views, opinions, beliefs, or strategies represented in published articles and subsequent comments do not necessarily represent the views of Traversing Tradition or any employee thereof.

24 thoughts on “Deconstructing the “Scientific Miracles in the Quran” Argument

  1. it is wrong assertion to say a proven science is always subjective to change. all scientists agree that such scientific issue is useless and can’t build upon. Carl Popper in his book (the logic of scientific discovery): Internal consistency – a necessary condition which every scientific theory has to satisfy. Inconsistent theoretical systems are to be rejected.

    Heather Douglas (2009) in her book: (science policy and the value free ideal)
    Internal consistency – an epistemic criterion which needs to be satisfied if a given scientific theory is to be accepted.
    hence, if science discover something properly and supported by many facts then that discovery is not subjective to change. for such a scientific discovery to correspond to Quran it will never change. so whenever a scientific miracle of Quran fulfil the conditions i.e. not being rashly decided, or imposed without being understood directly from verses, or propose by non-experts of the field, or it is still a non proven hypothesis with lack of supportive evidences, then such a scientific miracle will not change. the idea is that this world has built upon rigid unchangeable bases that god reveals them in Quran as scientific miracles.

  2. ‘The Quran: Scientific Exegesis’
    (the first ever scientific thafseer of the holy Quran).

    Automated functioning of the nonliving and living components of the universe is explained based on the computer model in the light of the Quranic revelations. The holy Quran reveals purpose of creation of man and the universe, purpose human life and the religion Islam, phenomena of life and death, future of man and the universe, resurrection and many such information. The book is the final version prepared through compilation of my research results including my first book “The Divine Expert System” published in 1998 and a few more books published later.

    Author: Prof. P.A. Wahid.
    Publisher: Adam Publishers, New Delhi, India, pages 525.

    Soft copy of this book can be downloaded free from ResearchGate. Link is given below:

  3. I have always found it interesting that the regularity of meteor showers which Muslim astronomers must have observed did not lead any of them to apostasy… though they might have been lead to interpret the Qur’an differently.

    It would be also interesting to find out if any of the early Islamic Astronomical texts attempted to study the cause of meteor showers or if any Muslim astronomer attempted to observe a crack in the Moon.

    The absence of any empirical evidence of a split in the moon shows the falsity of the “scientific miracles of the Qur’an” approach.

    Believing in a literal split in the Moon is an attestation of faith for a Muslim.

    May Allah SWT increase us in Knowledge (and hence Faith).

    1. Salam, Brother Ali, Have you read or encountered the philosophies of Ibn Arabi and Mulla Sadra?..contrary to you claim “Muslims have not be able to harness and build a metaphysical world view with God as the cause of all reality” Wahdat Al Wujud is precisely a declaration of God as “the Ground of Being “

  4. Bismillah. Assalamu alaikum brother. I agree that Islam should not be subject to what science currently deems as true. Beyond what we observe with our eyes and how correlate it with what we read in Islamic texts, is a world of the unknown and the unseen which is often referred to in Quran and Hadith.
    I have been researching flat earth theories and Islamic astronomy. Indeed, much of what is widely considered truth has been proven doubtful and/or mere deception by many flat earth arguments. So, in the end when we try to force the Qur’an to fit with “modern science”/scientism, we really only cause confusion in the long run (i.e. the Qur’an is egg-shaped arugment) because most of modern heliocentrism contradicts what is in the Quran.

  5. Science is probabilistic,like the Hadith science which is based on educated guesses rather than 100% certainty.

  6. What about alleged verses in the Quran that contradict science, like semen coming from a man’s back and woman’s ribs?

  7. Salaam

    Nice article. I enjoyed reading it and I am of the opinion that we cannot and shouldn’t have Imaan based on science.

    I do however have a few questions:

    – What do you make of other ‘miracles’ such as the preservation of the Quran, the challenge to manking to produce a verse like the Quran, etc? Do you find these problematic in any way?

    – Of the ‘scientific miracles’ that you listed as being those often quoted by Muslims, most if not all are in line with modern science. What do you make of this or how do you feel we should view these? What should be our position or stance when reading the stages of embryology, information about the Earth, mountains etc?

    – Again, of the ‘scientific miracles’ that are mentioned/listed, they were not common knowledge 1400 years ago. How would you respond to this?

    – Is there any harm in viewing ‘miracles’, not only the ones that appear to be in line with science, but the preservation of Firaun, the location of the docking of Noah’s ark etc as complimenting and boosting our Imaan – whilst at the same time, our Imaan not being dependant on them?


    1. There is nothing wrong with honesty, but in my opinion the miracles of the Quran is a misnomer as the Quran, as a matter of our faith, IS a miracle.

      So to refute one claim, unless it is just ridiculous, shows a serious lack of faith in my opinion, one that makes it difficult to believe this is the writing of a Muslim, and what I really think is that the person has more faith in science than is appropriate and than in Islam.

      I don’t want to toss around accusations but who takes it upon themselves to refute what others believe within their own religion as if there were harm in disagreeing with this author, but no harm in disputing a book wherein every word is a miracle.

      To not believe that the Quran is a miracle is tantamount to not being a Muslim, and nothing has really been refuted in the article that a different interpretation could not solve.

      Does a Muslim believe that the Quran should be void of scientific miracles only possibly confirmed by modern science?

      Of course not. They don’t refute them either, again, unless it is just a ridiculous claim by someone who doesn’t know any better, but the famous miracles in the miraculous Quran aren’t something that a Muslim refutes, even if they are not convinced, in this instance the author is convinced, just in the wrong direction.

  8. وعليكم السلام

    Thank you for getting in touch with us.

    I agree that a distinction should be drawn between scientific phenomena and scientific theories. However the aim of the article is to show why using such phenomena or theories is not effective to argue for the truth of the Quran. To give you an example of why such an approach might be problematic, imagine a scenario in which we use scientific phenomena. Let us suppose I am speaking to an atheist and mention that the Quran mentions scientific phenomena that we can observe. Someone could – and they usually do – present evidence that before the Quran was revealed, someone else had mentioned the same thing. So it wouldn’t really do much benefit in arguing for the Quran’s truth.

    Having said that, I believe that such phenomena do have a reason for them. Allah asks us to reflect over His creation, so we can see the divine manifestation. The fact that we can view and comprehend the world, with its regularities and contingencies is proof that everything points towards a Being that must have bought it into existence. While those claims don’t necessarily have to be used in an argument like the “scientific miracles in the Quran,” they certainly are worth reflecting on to find deeper meaning about reality and the nature of the world itself.

    InshAllah I will do a future post on the argument from contingency, otherwise known as Leibniz’s cosmological argument, or in recent years popularized as the argument from necessary existence by Alexander Pruss and Joshua Rasmussen, where I will include mention of these phenomena.

    Hope that answers your question.


  9. Aslamu 3laikum w rahmatu Allah,

    firstly, I would like to say what a great article this was. Convincing, precise, and eye-opening. BarakAllahu feek.

    My few questions are:

    I see why adopting scientific theories like the Big Bang and attempting to explain them/correlate them with the Qur’an are problematic. Like you said “Science is ever-changing”, but won’t you agree that some forms of science/scientific discovery are not subject to change? Some well-known phenomena are mentioned in the Qura’an. For instance the two seas that don’t mix.

    قال تعالى
    مرج البحرين يلتقيان بينهما برزخ لا يبغيان

    and also

    قال تعالى
    فَلاَ أُقْسِمُ بِالْخُنّسِ. الْجَوَارِ الْكُنّسِ

    As the reference to planetary system.

    So don’t you think that the problem lies there and that the solution we need to is to make a distinction between scientific phenomena and scientific theory? For how else can we use science as a tool if we are not to provide these “scientific phenomena” related Quranic verses as proof of the divinity of Qur’an.

    Correct me if I am wrong. Great piece once again.

    1. @Ahmad Tamer, U r absolutely right on the point that there are many absolute fact is mentiined in the Quran.. We should not deny those.. Those who dont want to beleive in science related miraculous info in The Quran are of negative mentality due to their failure of understanding properly or fear of debate..U konow. a rational person when debate with atheists for long time, in his mind tendency of not beleiving easily develops. It occured in many people.. Same thinng applied they arenot able to answering some question they deny the full miracles related to scientistfic funny!

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